Medical Imaging

for the cure



Research Highlights of
Information Processing & Algorithms Laboratory

ABOUT

The Information Processing and Algorithms Laboratory (iPAL) is directed by Prof. Vishal Monga. Graduate research in iPAL broadly encompasses signal and image processing theory and applications with a particular focus on capturing practical real-world constraints via convex optimization theory and algorithms.

RECENT PROJECTS

Histopathological Image Classification using Discriminative Feature-Oriented Dictionary Learning

We propose an automatic feature discovery framework for extracting discriminative class-specific features and present a low-complexity method for classification and disease grading in histopathology.Essentially, our Discriminative Feature-oriented Dictionary Learning (DFDL) method learns class-specific features which are suitable for representing samples from the same class while are poorly capable of representing samples from other classes.

Learning Based Segmentation of CT Brain Images: Application to Post-Operative Hydrocephalic Scans

Most intensity and feature based segmentation methods fail to separate subdurals from brain and CSF as subdural geometry varies greatly across different patients and their intensity varies with time. We combat this problem by a learning approach that treats segmentation as supervised classification at the pixel level, i.e. a training set of CT scans with labeled pixel identities is employed. We also demonstrate that the proposed algorithm is computationally less burdensome and exhibits a graceful degradation against number of training samples, enhancing its deployment potential.

Deep MR Image Super-Resolution Using Structural Priors

Unlike regular optical imagery, for MR image super-resolution generous training is often unavailable. We therefore propose the use of image priors, namely a low-rank structure and a sharpness prior to enhance deep MR image superresolution. Experiments performed on two publicly available MR brain image databases exhibit promising results particularly when training imagery is limited.

Deep Networks With Shape Priors For Nucleus Detection

Nuclei detection has been a topic of enduring interest with promising recent success shown by deep learning methods. These methods train for example convolutional neural networks (CNNs) with a training set of input images and known, labeled nuclei locations. Many of these methods are supplemented by spatial or morphological processing. We develop a new approach that we call Shape Priors with Convolutional Neural Networks (SP-CNN) to perform significantly enhanced nuclei detection.

Deep Retinal Image Segmentation Under Geometrical Priors

Vessel segmentation of retinal images is a key diagnostic capability in ophthalmology. This problem faces several challenges including low contrast, variable vessel size and thickness, and presence of interfering pathology such as micro-aneurysms and hemorrhages. Early approaches addressing this problem employed hand-crafted filters to capture vessel structures, accompanied by morphological post-processing. More recently, deep learning techniques have been employed with significantly enhanced segmentation accuracy. We propose a novel domain enriched deep network that consists of two components: 1) a representation network that learns geometric features specific to retinal images, and 2) a custom designed computationally efficient residual task network that utilizes the features obtained from the representation layer to perform pixel-level segmentation. The representation and task networks are {\em jointly learned} for any given training set. To obtain physically meaningful and practically effective representation filters, we propose two new constraints that are inspired by expected prior structure on these filters: 1) orientation constraint that promotes geometric diversity of curvilinear features, and 2) a data adaptive noise regularizer that penalizes false positives. Multi-scale extensions are developed to enable accurate detection of thin vessels.

Email
ipal.psu@gmail.com

Address
104 Electrical Engineering East,
University Park, PA 16802, USA

Lab Phone:
814-863-7810
814-867-4564